Natural Selections

Natural Selections is a reading group for discussing recent and fundamental research papers pertaining to evolutionary genetics.

Time: For the Spring 2022 semester we will meet in person every other Thursday at 2:00 PM. Our first meeting of the semester is Feb. 10.

Location: Room 5406 in the Genetics Building.

To join the mailing list go to natural-selections@g-groups.wisc.edu. Note: those who responded accordingly on our initial survey should already be members of this group (make sure to use the  google account corresponding with the email you replied with).

Contact: Reach out to Emma Howell with any questions or to propose future readings.

Structure: Group members will sign up to choose papers and present a brief summary at the meeting. A broad range of papers are potentially appropriate for this reading group, but (a) please review the paper yourself first to ensure it is a good choice, and (b) consider choosing papers with a good level of detail, i.e., not just from Nature/Science.


Readings:

PDF files of these papers can be found on Box.

Spring 2022:

May 5. Leinonen T, McCairns RJS, O’Hara R and Merilä J. (2013) QST-FST comparisons: evolutionary and ecological insights from genomic heterogeneity. Nat. Rev. Genet. 14:179-190.

Apr. 21. Liu H and Zhang J (2021) The rate and molecular spectrum of mutation are selectively maintained in yeast. Nat. Comm. 12:4044.

Apr. 7. Orr HA (1998) Genetics of adaptation: The distribution of factors fixed during adaptive evolution. Evolution 52:935-949. See also: Connallon T and Hodgins KA (2021) Allen Orr and the genetics of adaptation. Evolution 75:2624-2640.

Mar. 24. Tennessen JA (2018) Gene buddies: linked balanced polymorphisms reinforce each other even in the absence of epistasis. PeerJ doi:10.7717/peerj.5110.

Mar 10. Naser-Khdour S, Minh BQ, and Lanfear R (2021) Assessing confidence in root placement on phylogenies: An empirical study using nonreversible models for mammals. Syst. Biol. doi:10.1093/sysbio/syab067.

Feb. 24. Cano AV, Rozhoňová H, Stoltxfus A, McCandlish DM, and Payne JL (2022) Mutation bias shapes the spectrum of adaptive substitutions. PNAS 119:e2119720119.

Feb. 10. Booker TR, Yeaman S, and Whitlock MC. (2020) Global adaptation complicates the interpretation of genome scans for local adaptation. Evol. Lett. 5:4-15.

Fall 2021:

Dec. 13. Wilson AJ, Pemberton JM, Pilkington JG, Coltman DW, Mifsud DV, Clutton-Brock TH, and Kruuk LEB (2006) Environmental coupling of selection and heritability limits evolution. Plos Biol. 4(7): e216.

Nov. 29. Kinsler G, Geiler-Samerotte K and Petrov DA (2020) Fitness variation across subtle environmental perturbations reveals local modularity and global pleiotropy of adaptation. eLife 9:e61271.

Nov. 15. Barghi N and Schlotterer C (2020) Distinct patterns of selective sweep and polygenic adaptation in evolve and resequence studies. Genome Bio. Evol. 12:890-904.

Nov. 1. Reddy G and Desai MM (2021) Global epistasis emerges from a generic model of a complex trait. eLife 10:e64740.

Oct. 18. Ågren JA (2021) Sewall Wright’s criticism of the gene’s-eye view of evolution. Evolution 75:2326-2334.

Oct. 4. Buffalo V (2021) Quantifying the relationship between genetic diversity and population size suggests natural selection cannot explain Lewontin’s Paradox. eLife;10:e67509.